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  • Top cofit genes for LRK53_RS14815 from Rhodanobacter sp000427505 FW510-R12

    ClpXP protease specificity-enhancing factor
    SEED: Stringent starvation protein B
    KEGG: stringent starvation protein B

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS09475 bifunctional 2-methylcitrate dehydratase/aconitate hydratase no 0.49
    2 LRK53_RS01050 McrC family protein no 0.46
    3 LRK53_RS07680 hydroxymethylglutaryl-CoA lyase 0.58 0.46
    4 LRK53_RS00025 tetratricopeptide repeat protein no 0.45
    5 LRK53_RS13775 tRNA glutamyl-Q(34) synthetase GluQRS no 0.45
    6 LRK53_RS00620 alpha/beta hydrolase fold domain-containing protein no 0.45
    7 LRK53_RS00210 MFS transporter 0.28 0.45
    8 LRK53_RS11015 hypothetical protein no 0.44
    9 LRK53_RS18455 DUF3761 domain-containing protein no 0.44
    10 LRK53_RS03575 AI-2E family transporter no 0.44
    11 LRK53_RS14095 polyketide cyclase no 0.43
    12 LRK53_RS02245 MMPL family transporter no 0.43
    13 LRK53_RS09465 2-methylcitrate synthase no 0.43
    14 LRK53_RS13530 hypothetical protein no 0.43
    15 LRK53_RS14020 DUF2007 domain-containing protein no 0.43
    16 LRK53_RS12245 ribosome assembly RNA-binding protein YhbY no 0.43
    17 LRK53_RS01950 bacterioferritin 0.73 0.43
    18 LRK53_RS02030 phospholipase D family protein no 0.42
    19 LRK53_RS13385 methylcrotonoyl-CoA carboxylase no 0.42
    20 LRK53_RS10635 SDR family NAD(P)-dependent oxidoreductase no 0.42

    Or look for negative cofitness