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Cofit
Protein
Homologs
Top cofit genes for LRK53_RS12935 from
Rhodanobacter sp000427505 FW510-R12
GGDEF domain-containing protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS01250
outer membrane protein transport protein
no
0.54
2
LRK53
_RS01205
peptidyl-dipeptidase Dcp
no
0.48
3
LRK53
_RS17445
cysteine dioxygenase family protein
no
0.47
4
LRK53
_RS00790
peptidase S10
no
0.46
5
LRK53
_RS13080
cbb3-type cytochrome c oxidase subunit I
no
0.46
6
LRK53
_RS10245
FAD-binding oxidoreductase
no
0.46
7
LRK53
_RS01165
thiol:disulfide interchange protein DsbA/DsbL
no
0.45
8
LRK53
_RS01210
DUF3037 domain-containing protein
no
0.43
9
LRK53
_RS03725
response regulator
no
0.42
10
LRK53
_RS03710
DEAD/DEAH box helicase
no
0.42
11
LRK53
_RS12995
Na+/H+ antiporter
no
0.42
12
LRK53
_RS08190
sensor domain-containing protein
no
0.42
13
LRK53
_RS07320
MFS transporter
no
0.42
14
LRK53
_RS11905
hypothetical protein
no
0.42
15
LRK53
_RS13920
YajQ family cyclic di-GMP-binding protein
no
0.41
16
LRK53
_RS07830
type II toxin-antitoxin system HicB family antitoxin
no
0.41
17
LRK53
_RS05685
type IV pilus twitching motility protein PilT
no
0.40
18
LRK53
_RS10475
DHA2 family efflux MFS transporter permease subunit
no
0.40
19
LRK53
_RS09145
TIGR00730 family Rossman fold protein
no
0.39
20
LRK53
_RS07330
C40 family peptidase
no
0.39
Or look for
negative cofitness