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  • Top cofit genes for LRK53_RS12840 from Rhodanobacter sp000427505 FW510-R12

    rRNA pseudouridine synthase
    SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal small subunit pseudouridine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS05250 rubrerythrin family protein no 0.51
    2 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.63 0.48
    3 LRK53_RS06670 RIP metalloprotease RseP 0.24 0.47
    4 LRK53_RS03690 dihydroorotase no 0.46
    5 LRK53_RS08350 tryptophan synthase subunit beta 0.33 0.46
    6 LRK53_RS15750 dioxygenase no 0.45
    7 LRK53_RS13815 alpha/beta fold hydrolase no 0.45
    8 LRK53_RS09865 thioesterase no 0.44
    9 LRK53_RS09260 ABC transporter ATP-binding protein no 0.44
    10 LRK53_RS02605 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 no 0.43
    11 LRK53_RS13770 protease HtpX 0.45 0.42
    12 LRK53_RS11215 acetyl-CoA C-acyltransferase no 0.42
    13 LRK53_RS14110 GNAT family N-acetyltransferase no 0.42
    14 LRK53_RS00115 hypothetical protein no 0.41
    15 LRK53_RS13865 ABC transporter permease 0.27 0.41
    16 LRK53_RS13885 aminopeptidase no 0.41
    17 LRK53_RS01375 pseudouridine synthase no 0.41
    18 LRK53_RS11300 polysaccharide biosynthesis protein no 0.41
    19 LRK53_RS12860 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.40
    20 LRK53_RS00470 GNAT family N-acetyltransferase 0.79 0.40

    Or look for negative cofitness