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  • Top cofit genes for LRK53_RS12640 from Rhodanobacter sp000427505 FW510-R12

    cell wall hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS14235 phosphodiester glycosidase family protein no 0.49
    2 LRK53_RS10360 LysR substrate-binding domain-containing protein no 0.42
    3 LRK53_RS04660 TonB-dependent receptor no 0.42
    4 LRK53_RS13140 D-serine/D-alanine/glycine transporter no 0.41
    5 LRK53_RS04590 TetR/AcrR family transcriptional regulator no 0.41
    6 LRK53_RS04730 APC family permease no 0.40
    7 LRK53_RS13900 rhomboid family intramembrane serine protease no 0.39
    8 LRK53_RS14850 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.68 0.37
    9 LRK53_RS04515 serine hydrolase no 0.37
    10 LRK53_RS00425 mercuric reductase no 0.37
    11 LRK53_RS08520 amino acid permease no 0.37
    12 LRK53_RS04550 monofunctional biosynthetic peptidoglycan transglycosylase 0.41 0.37
    13 LRK53_RS14700 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA no 0.37
    14 LRK53_RS18215 single-stranded DNA-binding protein no 0.36
    15 LRK53_RS02245 MMPL family transporter no 0.36
    16 LRK53_RS03425 insulinase family protein no 0.35
    17 LRK53_RS17700 hypothetical protein no 0.35
    18 LRK53_RS10140 aromatic/alkene monooxygenase hydroxylase subunit beta no 0.34
    19 LRK53_RS12455 transposase no 0.34
    20 LRK53_RS06600 polyprenyl synthetase family protein no 0.33

    Or look for negative cofitness