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Cofit
Top cofit genes for LRK53_RS11005 from
Rhodanobacter sp000427505 FW510-R12
Tn3 family resolvase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS18795
TraU family protein
no
0.45
2
LRK53
_RS07680
hydroxymethylglutaryl-CoA lyase
no
0.43
3
LRK53
_RS11155
glutamine-hydrolyzing GMP synthase
no
0.41
4
LRK53
_RS00345
sorbitol dehydrogenase family protein
no
0.41
5
LRK53
_RS13245
SGNH/GDSL hydrolase family protein
no
0.40
6
LRK53
_RS16625
efflux RND transporter permease subunit
no
0.40
7
LRK53
_RS04075
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
no
0.40
8
LRK53
_RS13955
LysR substrate-binding domain-containing protein
no
0.40
9
LRK53
_RS16500
DUF3228 family protein
no
0.39
10
LRK53
_RS12585
MotA/TolQ/ExbB proton channel family protein
no
0.39
11
LRK53
_RS03745
peptidoglycan DD-metalloendopeptidase family protein
no
0.39
12
LRK53
_RS05110
YebC/PmpR family DNA-binding transcriptional regulator
no
0.39
13
LRK53
_RS03205
hypothetical protein
no
0.38
14
LRK53
_RS16735
ATP-dependent DNA helicase RecG
no
0.38
15
LRK53
_RS16900
ribose-5-phosphate isomerase RpiA
no
0.38
16
LRK53
_RS01970
integrase arm-type DNA-binding domain-containing protein
no
0.38
17
LRK53
_RS05295
phosphoribosylformylglycinamidine synthase
no
0.38
18
LRK53
_RS16385
isochorismatase family protein
no
0.38
19
LRK53
_RS05220
nucleoside deaminase
no
0.37
20
LRK53
_RS13510
polynucleotide adenylyltransferase PcnB
no
0.37
Or look for
negative cofitness