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  • Top cofit genes for LRK53_RS10550 from Rhodanobacter sp000427505 FW510-R12

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS01915 MFS transporter no 0.44
    2 LRK53_RS03245 glycerophosphodiester phosphodiesterase no 0.39
    3 LRK53_RS16050 hypothetical protein no 0.36
    4 LRK53_RS05930 endonuclease domain-containing protein no 0.35
    5 LRK53_RS09140 YhdH/YhfP family quinone oxidoreductase no 0.35
    6 LRK53_RS10245 FAD-binding oxidoreductase no 0.35
    7 LRK53_RS11610 low molecular weight phosphotyrosine protein phosphatase no 0.35
    8 LRK53_RS07570 glutamate 5-kinase no 0.33
    9 LRK53_RS13185 NAD(P)H-dependent oxidoreductase no 0.33
    10 LRK53_RS16340 CDP-alcohol phosphatidyltransferase family protein no 0.33
    11 LRK53_RS04600 acyl-CoA dehydrogenase no 0.33
    12 LRK53_RS10515 hypothetical protein no 0.32
    13 LRK53_RS18630 glycosyltransferase family 39 protein no 0.32
    14 LRK53_RS18700 H-NS histone family protein no 0.32
    15 LRK53_RS07350 hypothetical protein no 0.32
    16 LRK53_RS09575 hypothetical protein no 0.31
    17 LRK53_RS07885 helix-turn-helix domain-containing protein no 0.31
    18 LRK53_RS01530 YiiD C-terminal domain-containing protein no 0.31
    19 LRK53_RS02635 type I-F CRISPR-associated helicase Cas3f 0.23 0.30
    20 LRK53_RS07645 SDR family oxidoreductase no 0.30

    Or look for negative cofitness