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  • Top cofit genes for LRK53_RS09460 from Rhodanobacter sp000427505 FW510-R12

    methylisocitrate lyase
    SEED: Methylisocitrate lyase (EC 4.1.3.30)
    KEGG: methylisocitrate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS10700 2-phosphosulfolactate phosphatase no 0.46
    2 LRK53_RS13565 isocitrate dehydrogenase 0.48 0.44
    3 LRK53_RS09475 bifunctional 2-methylcitrate dehydratase/aconitate hydratase 0.94 0.42
    4 LRK53_RS07705 ferrous iron transporter B no 0.41
    5 LRK53_RS00480 O-antigen translocase no 0.39
    6 LRK53_RS01745 TetR/AcrR family transcriptional regulator 0.47 0.38
    7 LRK53_RS16950 sensor histidine kinase no 0.38
    8 LRK53_RS01545 tetratricopeptide repeat protein no 0.38
    9 LRK53_RS07395 iron-sulfur cluster assembly accessory protein no 0.38
    10 LRK53_RS00390 4,5-DOPA dioxygenase extradiol no 0.38
    11 LRK53_RS03270 TonB-dependent receptor no 0.38
    12 LRK53_RS14110 GNAT family N-acetyltransferase no 0.38
    13 LRK53_RS01520 rhodanese-like domain-containing protein 0.90 0.38
    14 LRK53_RS16635 efflux RND transporter periplasmic adaptor subunit no 0.38
    15 LRK53_RS03200 UbiA family prenyltransferase no 0.37
    16 LRK53_RS14230 8-oxo-dGTP diphosphatase no 0.37
    17 LRK53_RS15240 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.31 0.36
    18 LRK53_RS03375 isocitrate lyase 0.78 0.36
    19 LRK53_RS03715 cell division ATP-binding protein FtsE no 0.36
    20 LRK53_RS02095 helix-turn-helix domain-containing protein no 0.35

    Or look for negative cofitness