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  • Top cofit genes for LRK53_RS09295 from Rhodanobacter sp000427505 FW510-R12

    LysR substrate-binding domain-containing protein
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS18160 thermonuclease family protein no 0.42
    2 LRK53_RS00290 Xaa-Pro peptidase family protein no 0.41
    3 LRK53_RS07080 M20 family metallopeptidase 0.41 0.41
    4 LRK53_RS09385 hypothetical protein no 0.40
    5 LRK53_RS13940 peptide-methionine (R)-S-oxide reductase MsrB no 0.40
    6 LRK53_RS14840 trypsin-like peptidase domain-containing protein no 0.39
    7 LRK53_RS05540 sigma-54 dependent transcriptional regulator 0.59 0.39
    8 LRK53_RS17240 succinate dehydrogenase iron-sulfur subunit no 0.39
    9 LRK53_RS11010 Tn3 family transposase no 0.39
    10 LRK53_RS07385 MalM family protein no 0.38
    11 LRK53_RS13635 recombination regulator RecX no 0.38
    12 LRK53_RS07985 hypothetical protein no 0.37
    13 LRK53_RS02575 ACP phosphodiesterase 0.51 0.37
    14 LRK53_RS02610 type I-F CRISPR-associated protein Csy3 no 0.37
    15 LRK53_RS15820 metal/formaldehyde-sensitive transcriptional repressor 0.22 0.37
    16 LRK53_RS01685 YceI family protein 0.46 0.36
    17 LRK53_RS07990 glutathione S-transferase family protein no 0.36
    18 LRK53_RS17065 N-acetylmuramoyl-L-alanine amidase no 0.36
    19 LRK53_RS18950 hypothetical protein no 0.36
    20 LRK53_RS15810 LysR family transcriptional regulator 0.42 0.35

    Or look for negative cofitness