Top cofit genes for LRK53_RS09080 from Rhodanobacter sp000427505 FW510-R12

tRNA pseudouridine(55) synthase TruB
SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase B

Rank Hit Name Description Conserved? Cofitness  
1 LRK53_RS09090 polyribonucleotide nucleotidyltransferase 0.71 0.69
2 LRK53_RS16400 DUF1329 domain-containing protein no 0.66
3 LRK53_RS02735 type II secretion system inner membrane protein GspF 0.37 0.64
4 LRK53_RS02780 type II secretion system secretin GspD no 0.62
5 LRK53_RS02730 type II secretion system ATPase GspE 0.92 0.59
6 LRK53_RS16645 MarR family transcriptional regulator no 0.57
7 LRK53_RS02745 GspH/FimT family pseudopilin no 0.56
8 LRK53_RS14845 lytic transglycosylase domain-containing protein no 0.56
9 LRK53_RS10630 hypothetical protein no 0.55
10 LRK53_RS02760 type II secretion system protein GspK no 0.55
11 LRK53_RS10505 MBL fold metallo-hydrolase 0.51 0.55
12 LRK53_RS02770 type II secretion system protein GspM no 0.55
13 LRK53_RS05925 A24 family peptidase 0.87 0.55
14 LRK53_RS01585 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase no 0.54
15 LRK53_RS02090 DUF932 domain-containing protein no 0.54
16 LRK53_RS16550 tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.86 0.53
17 LRK53_RS15895 glycosyltransferase 0.68 0.53
18 LRK53_RS17640 Atxe2 family lasso peptide isopeptidase no 0.53
19 LRK53_RS15250 membrane assembly protein AsmA 0.40 0.53
20 LRK53_RS02765 PilN domain-containing protein no 0.53

Or look for negative cofitness