• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for LRK53_RS08405 from Rhodanobacter sp000427505 FW510-R12

    response regulator transcription factor
    SEED: response regulator in two-component regulatory system with PhoQ
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS01030 helix-turn-helix domain-containing protein no 0.44
    2 LRK53_RS07935 multidrug efflux RND transporter permease subunit 0.78 0.38
    3 LRK53_RS10215 cyclopropane fatty acyl phospholipid synthase 0.18 0.38
    4 LRK53_RS11075 thymidine phosphorylase family protein no 0.38
    5 LRK53_RS02415 carbohydrate ABC transporter permease no 0.38
    6 LRK53_RS14285 transposase no 0.37
    7 LRK53_RS03340 glutathione S-transferase family protein no 0.37
    8 LRK53_RS12410 amidohydrolase family protein no 0.37
    9 LRK53_RS13810 NADH:flavin oxidoreductase/NADH oxidase no 0.36
    10 LRK53_RS08125 TonB-dependent receptor no 0.36
    11 LRK53_RS09530 GTPase HflX 0.52 0.35
    12 LRK53_RS04315 pyridoxal-phosphate dependent enzyme no 0.35
    13 LRK53_RS16405 hypothetical protein no 0.33
    14 LRK53_RS08775 aromatic amino acid ammonia-lyase no 0.33
    15 LRK53_RS12070 kinase/pyrophosphorylase no 0.33
    16 LRK53_RS04245 beta-agarase no 0.33
    17 LRK53_RS17930 patatin-like phospholipase family protein 0.49 0.32
    18 LRK53_RS10585 hypothetical protein no 0.32
    19 LRK53_RS10560 zinc-dependent alcohol dehydrogenase family protein no 0.32
    20 LRK53_RS05175 7-cyano-7-deazaguanine synthase QueC no 0.32

    Or look for negative cofitness