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  • Top cofit genes for LRK53_RS08200 from Rhodanobacter sp000427505 FW510-R12

    endonuclease III
    SEED: Endonuclease III (EC 4.2.99.18)
    KEGG: endonuclease III

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS02905 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.20 0.43
    2 LRK53_RS12380 penicillin acylase family protein no 0.43
    3 LRK53_RS13795 cytochrome c no 0.41
    4 LRK53_RS15450 LysM peptidoglycan-binding domain-containing protein no 0.38
    5 LRK53_RS18960 hypothetical protein no 0.37
    6 LRK53_RS16375 3-isopropylmalate dehydratase large subunit 0.11 0.37
    7 LRK53_RS01400 fimbrial protein no 0.36
    8 LRK53_RS08515 high-potential iron-sulfur protein no 0.35
    9 LRK53_RS02460 GH1 family beta-glucosidase no 0.33
    10 LRK53_RS16070 RNB domain-containing ribonuclease 0.43 0.33
    11 LRK53_RS11100 AarF/UbiB family protein no 0.33
    12 LRK53_RS09980 hypothetical protein no 0.32
    13 LRK53_RS06150 PEP-CTERM sorting domain-containing protein no 0.32
    14 LRK53_RS05185 pilus assembly protein PilY 0.29 0.32
    15 LRK53_RS08145 TolC family protein 0.39 0.32
    16 LRK53_RS02800 pre-peptidase C-terminal domain-containing protein no 0.31
    17 LRK53_RS03620 ABC transporter permease no 0.31
    18 LRK53_RS13695 response regulator no 0.31
    19 LRK53_RS03025 pimeloyl-ACP methyl ester esterase BioH 0.62 0.31
    20 LRK53_RS05490 tetratricopeptide repeat-containing sulfotransferase family protein 0.41 0.30

    Or look for negative cofitness