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  • Top cofit genes for LRK53_RS08040 from Rhodanobacter sp000427505 FW510-R12

    23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
    SEED: Protein involved in catabolism of external DNA

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS12390 aldehyde reductase no 0.45
    2 LRK53_RS05505 ABC transporter ATP-binding protein 0.32 0.44
    3 LRK53_RS10660 acyl-CoA dehydrogenase family protein no 0.44
    4 LRK53_RS04075 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.16 0.43
    5 LRK53_RS04190 dihydrolipoyl dehydrogenase 0.53 0.43
    6 LRK53_RS15520 MFS transporter no 0.42
    7 LRK53_RS03340 glutathione S-transferase family protein no 0.41
    8 LRK53_RS18810 S26 family signal peptidase no 0.40
    9 LRK53_RS02025 DUF6361 family protein no 0.40
    10 LRK53_RS12680 polyhydroxyalkanoate synthesis repressor PhaR no 0.40
    11 LRK53_RS04475 electron transfer flavoprotein-ubiquinone oxidoreductase no 0.39
    12 LRK53_RS15705 RNA polymerase factor sigma-54 0.63 0.39
    13 LRK53_RS15180 chemotaxis protein no 0.38
    14 LRK53_RS00820 TonB-dependent receptor no 0.38
    15 LRK53_RS10215 cyclopropane fatty acyl phospholipid synthase 0.70 0.38
    16 LRK53_RS11425 RnfH family protein 0.19 0.37
    17 LRK53_RS15075 flagellar motor switch protein FliG 0.53 0.37
    18 LRK53_RS16540 tRNA-Gly no 0.37
    19 LRK53_RS17890 hypothetical protein 0.47 0.36
    20 LRK53_RS12250 Mth938-like domain-containing protein no 0.36

    Or look for negative cofitness