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  • Top cofit genes for LRK53_RS08005 from Rhodanobacter sp000427505 FW510-R12

    transcription-repair coupling factor
    SEED: Transcription-repair coupling factor

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS03345 DPP IV N-terminal domain-containing protein no 0.43
    2 LRK53_RS16210 M23 family metallopeptidase no 0.43
    3 LRK53_RS01640 divalent-cation tolerance protein CutA no 0.37
    4 LRK53_RS16030 SET domain-containing protein-lysine N-methyltransferase 0.29 0.37
    5 LRK53_RS04315 pyridoxal-phosphate dependent enzyme no 0.36
    6 LRK53_RS02405 YecA family protein 0.32 0.36
    7 LRK53_RS00905 response regulator no 0.35
    8 LRK53_RS04775 cytochrome b 0.27 0.35
    9 LRK53_RS17470 nicotinamidase no 0.34
    10 LRK53_RS03250 ectonucleotide pyrophosphatase/phosphodiesterase no 0.34
    11 LRK53_RS09900 transcriptional repressor LexA 0.69 0.34
    12 LRK53_RS04370 cystathionine gamma-synthase 0.41 0.33
    13 LRK53_RS02290 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.84 0.32
    14 LRK53_RS00140 class 1 fructose-bisphosphatase 0.92 0.32
    15 LRK53_RS14995 RNA polymerase sigma factor FliA 0.88 0.32
    16 LRK53_RS15470 M28 family metallopeptidase no 0.32
    17 LRK53_RS04020 tetratricopeptide repeat-containing sulfotransferase family protein 0.58 0.32
    18 LRK53_RS05005 TonB-dependent receptor no 0.31
    19 LRK53_RS18380 toprim domain-containing protein no 0.31
    20 LRK53_RS00830 heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein no 0.31

    Or look for negative cofitness