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  • Top cofit genes for LRK53_RS07935 from Rhodanobacter sp000427505 FW510-R12

    multidrug efflux RND transporter permease subunit
    SEED: RND efflux system, inner membrane transporter CmeB

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS07940 efflux RND transporter periplasmic adaptor subunit 0.99 0.69
    2 LRK53_RS08090 CusA/CzcA family heavy metal efflux RND transporter no 0.63
    3 LRK53_RS14105 sensor histidine kinase 0.65 0.56
    4 LRK53_RS08085 efflux RND transporter periplasmic adaptor subunit 0.62 0.52
    5 LRK53_RS12115 SurA N-terminal domain-containing protein no 0.50
    6 LRK53_RS06955 GNAT family N-acetyltransferase 0.49 0.45
    7 LRK53_RS08835 Slp family lipoprotein no 0.42
    8 LRK53_RS01275 cytochrome c oxidase subunit II 0.54 0.42
    9 LRK53_RS01625 TlpA family protein disulfide reductase 0.44 0.40
    10 LRK53_RS11490 preprotein translocase subunit SecG 0.53 0.39
    11 LRK53_RS09805 TraB/GumN family protein no 0.38
    12 LRK53_RS07030 ABC transporter permease 0.55 0.38
    13 LRK53_RS05990 glycosyltransferase no 0.38
    14 LRK53_RS17120 porin family protein no 0.37
    15 LRK53_RS12740 cytochrome c-type biogenesis protein CcmH no 0.37
    16 LRK53_RS04240 amino acid permease no 0.37
    17 LRK53_RS07035 TolC family protein 0.60 0.36
    18 LRK53_RS13975 L-histidine N(alpha)-methyltransferase 0.34 0.36
    19 LRK53_RS10530 acyl-CoA dehydrogenase family protein no 0.35
    20 LRK53_RS02995 sterol desaturase family protein no 0.35

    Or look for negative cofitness