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Cofit
Protein
Homologs
Top cofit genes for LRK53_RS07330 from
Rhodanobacter sp000427505 FW510-R12
C40 family peptidase
SEED: NLP/P60 family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS01250
outer membrane protein transport protein
no
0.59
2
LRK53
_RS05685
type IV pilus twitching motility protein PilT
no
0.54
3
LRK53
_RS01395
hypothetical protein
no
0.51
4
LRK53
_RS03740
S41 family peptidase
no
0.48
5
LRK53
_RS01135
tetratricopeptide repeat-containing sulfotransferase family protein
no
0.47
6
LRK53
_RS10535
acyl-CoA dehydrogenase family protein
no
0.47
7
LRK53
_RS01280
cytochrome c oxidase subunit I
no
0.47
8
LRK53
_RS18705
hypothetical protein
no
0.45
9
LRK53
_RS10265
2-hydroxymuconic semialdehyde dehydrogenase
no
0.45
10
LRK53
_RS18420
hypothetical protein
no
0.44
11
LRK53
_RS16970
cAMP-activated global transcriptional regulator CRP
0.40
0.44
12
LRK53
_RS07895
hypothetical protein
no
0.44
13
LRK53
_RS01220
hypothetical protein
no
0.43
14
LRK53
_RS11780
cytochrome-c oxidase, cbb3-type subunit I
no
0.42
15
LRK53
_RS10155
phenol hydroxylase subunit P4
no
0.41
16
LRK53
_RS18260
DUF4400 domain-containing protein
no
0.41
17
LRK53
_RS00790
peptidase S10
no
0.41
18
LRK53
_RS03285
M61 family metallopeptidase
no
0.41
19
LRK53
_RS11795
cytochrome-c oxidase, cbb3-type subunit III
no
0.40
20
LRK53
_RS13295
helix-turn-helix domain-containing protein
no
0.40
Or look for
negative cofitness