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  • Top cofit genes for LRK53_RS06105 from Rhodanobacter sp000427505 FW510-R12

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS17585 M14 family metallocarboxypeptidase no 0.48
    2 LRK53_RS08735 Xaa-Pro peptidase family protein no 0.43
    3 LRK53_RS01105 hypothetical protein no 0.41
    4 LRK53_RS14625 hypothetical protein no 0.40
    5 LRK53_RS08600 phosphatase PAP2 family protein no 0.39
    6 LRK53_RS08010 GNAT family N-acetyltransferase no 0.39
    7 LRK53_RS01055 AAA family ATPase no 0.38
    8 LRK53_RS09290 hypothetical protein no 0.37
    9 LRK53_RS04990 sigma-54 dependent transcriptional regulator 0.64 0.37
    10 LRK53_RS03220 sulfatase-like hydrolase/transferase no 0.37
    11 LRK53_RS10645 enoyl-CoA hydratase-related protein no 0.36
    12 LRK53_RS18240 AAA-like domain-containing protein no 0.36
    13 LRK53_RS13320 IS4 family transposase no 0.35
    14 LRK53_RS08525 amino acid permease no 0.35
    15 LRK53_RS06615 NYN domain-containing protein no 0.34
    16 LRK53_RS08520 amino acid permease no 0.34
    17 LRK53_RS10630 hypothetical protein no 0.34
    18 LRK53_RS16400 DUF1329 domain-containing protein no 0.34
    19 LRK53_RS00445 sigma-70 family RNA polymerase sigma factor no 0.34
    20 LRK53_RS14710 quinolinate synthase NadA no 0.34

    Or look for negative cofitness