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  • Top cofit genes for LRK53_RS05730 from Rhodanobacter sp000427505 FW510-R12

    twitching motility response regulator PilG
    SEED: twitching motility protein PilG
    KEGG: twitching motility two-component system response regulator PilG

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS07820 pilus assembly protein PilY 0.81 0.42
    2 LRK53_RS10500 transposase no 0.41
    3 LRK53_RS16165 cob(I)yrinic acid a,c-diamide adenosyltransferase no 0.40
    4 LRK53_RS09660 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB 0.11 0.39
    5 LRK53_RS07825 prepilin-type N-terminal cleavage/methylation domain-containing protein 0.70 0.39
    6 LRK53_RS11875 hypothetical protein no 0.38
    7 LRK53_RS05750 Hpt domain-containing protein 0.63 0.37
    8 LRK53_RS07915 methionine synthase 0.27 0.35
    9 LRK53_RS04300 DUF4398 domain-containing protein 0.39 0.34
    10 LRK53_RS01335 bile acid:sodium symporter no 0.34
    11 LRK53_RS12430 SRPBCC family protein no 0.34
    12 LRK53_RS16690 pilus assembly protein PilP 0.97 0.33
    13 LRK53_RS00480 O-antigen translocase no 0.33
    14 LRK53_RS06570 DUF615 domain-containing protein no 0.33
    15 LRK53_RS07810 PilX N-terminal domain-containing pilus assembly protein 0.78 0.33
    16 LRK53_RS09140 YhdH/YhfP family quinone oxidoreductase no 0.33
    17 LRK53_RS01270 DUF2244 domain-containing protein no 0.33
    18 LRK53_RS04950 carbohydrate kinase no 0.32
    19 LRK53_RS09220 glutathione transferase GstA no 0.32
    20 LRK53_RS05940 type IV-A pilus assembly ATPase PilB 0.98 0.32

    Or look for negative cofitness