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Cofit
Top cofit genes for LRK53_RS04815 from
Rhodanobacter sp000427505 FW510-R12
IS5 family transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS02345
hydroxymethylglutaryl-CoA reductase, degradative
no
0.46
2
LRK53
_RS11475
response regulator
no
0.46
3
LRK53
_RS14080
GldG family protein
no
0.44
4
LRK53
_RS04120
DUF6491 family protein
no
0.43
5
LRK53
_RS17530
alpha,alpha-trehalase
no
0.42
6
LRK53
_RS14085
ABC transporter permease subunit
no
0.42
7
LRK53
_RS10130
sigma 54-interacting transcriptional regulator
no
0.42
8
LRK53
_RS01395
hypothetical protein
no
0.42
9
LRK53
_RS09600
sensor domain-containing diguanylate cyclase
no
0.41
10
LRK53
_RS07320
MFS transporter
no
0.40
11
LRK53
_RS06995
glycosyl transferase
no
0.39
12
LRK53
_RS09145
TIGR00730 family Rossman fold protein
no
0.39
13
LRK53
_RS04015
TonB-dependent receptor
no
0.39
14
LRK53
_RS12590
DNA internalization-related competence protein ComEC/Rec2
no
0.38
15
LRK53
_RS00750
efflux RND transporter permease subunit
no
0.38
16
LRK53
_RS11850
hypothetical protein
no
0.38
17
LRK53
_RS13820
cold-shock protein
no
0.38
18
LRK53
_RS11070
MBL fold metallo-hydrolase
no
0.37
19
LRK53
_RS11300
polysaccharide biosynthesis protein
no
0.37
20
LRK53
_RS00870
alpha-2-macroglobulin family protein
no
0.37
Or look for
negative cofitness