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Gene
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Cofit
Protein
Homologs
Top cofit genes for LRK53_RS04590 from
Rhodanobacter sp000427505 FW510-R12
TetR/AcrR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS03090
ketol-acid reductoisomerase
no
0.67
2
LRK53
_RS03100
3-isopropylmalate dehydrogenase
no
0.66
3
LRK53
_RS03675
glucokinase
no
0.66
4
LRK53
_RS03105
3-isopropylmalate dehydratase small subunit
no
0.65
5
LRK53
_RS17395
PepSY domain-containing protein
no
0.65
6
LRK53
_RS08450
YerC/YecD family TrpR-related protein
no
0.64
7
LRK53
_RS05625
shikimate kinase
no
0.64
8
LRK53
_RS03125
hypothetical protein
no
0.62
9
LRK53
_RS08485
imidazole glycerol phosphate synthase subunit HisF
no
0.62
10
LRK53
_RS04870
sugar porter family MFS transporter
no
0.61
11
LRK53
_RS09490
glycine C-acetyltransferase
no
0.61
12
LRK53
_RS15720
RNase adapter RapZ
0.94
0.61
13
LRK53
_RS09610
aminomethyl-transferring glycine dehydrogenase
no
0.61
14
LRK53
_RS03120
2-isopropylmalate synthase
no
0.60
15
LRK53
_RS02245
MMPL family transporter
no
0.60
16
LRK53
_RS03115
branched-chain amino acid transaminase
no
0.59
17
LRK53
_RS01735
TolC family outer membrane protein
0.96
0.59
18
LRK53
_RS09465
2-methylcitrate synthase
0.80
0.59
19
LRK53
_RS08475
imidazole glycerol phosphate synthase subunit HisH
no
0.59
20
LRK53
_RS03110
3-isopropylmalate dehydratase large subunit
no
0.59
Or look for
negative cofitness