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Cofit
Protein
Homologs
Top cofit genes for LRK53_RS03280 from
Rhodanobacter sp000427505 FW510-R12
GGDEF domain-containing protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS02575
ACP phosphodiesterase
no
0.40
2
LRK53
_RS12865
serine protein kinase RIO
no
0.38
3
LRK53
_RS08195
class I SAM-dependent methyltransferase
no
0.36
4
LRK53
_RS09295
LysR substrate-binding domain-containing protein
no
0.35
5
LRK53
_RS07080
M20 family metallopeptidase
no
0.34
6
LRK53
_RS16010
hypothetical protein
no
0.34
7
LRK53
_RS10020
CBS domain-containing protein
no
0.33
8
LRK53
_RS10970
MFS transporter
no
0.32
9
LRK53
_RS19040
hypothetical protein
no
0.32
10
LRK53
_RS19110
hypothetical protein
no
0.32
11
LRK53
_RS07085
YggS family pyridoxal phosphate-dependent enzyme
no
0.32
12
LRK53
_RS05045
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
no
0.32
13
LRK53
_RS04925
glycoside hydrolase
no
0.32
14
LRK53
_RS01420
hypothetical protein
no
0.31
15
LRK53
_RS07385
MalM family protein
no
0.31
16
LRK53
_RS05815
citrate transporter
no
0.31
17
LRK53
_RS06530
mismatch-specific DNA-glycosylase
no
0.30
18
LRK53
_RS00580
hypothetical protein
no
0.30
19
LRK53
_RS00595
DUF2945 domain-containing protein
no
0.30
20
LRK53
_RS09920
non-homologous end-joining DNA ligase
no
0.30
Or look for
negative cofitness