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  • Top cofit genes for LRK53_RS02790 from Rhodanobacter sp000427505 FW510-R12

    EAL domain-containing protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS03015 transporter no 0.55
    2 LRK53_RS02955 autotransporter domain-containing protein no 0.50
    3 LRK53_RS04015 TonB-dependent receptor no 0.47
    4 LRK53_RS17465 hypothetical protein no 0.45
    5 LRK53_RS14800 DUF1631 domain-containing protein no 0.45
    6 LRK53_RS08330 fimbrial protein FimV no 0.43
    7 LRK53_RS01705 O-antigen ligase family protein no 0.41
    8 LRK53_RS01395 hypothetical protein no 0.40
    9 LRK53_RS17445 cysteine dioxygenase family protein 0.46 0.40
    10 LRK53_RS01260 restriction endonuclease no 0.40
    11 LRK53_RS12935 GGDEF domain-containing protein no 0.39
    12 LRK53_RS13555 aspartyl/asparaginyl beta-hydroxylase domain-containing protein no 0.39
    13 LRK53_RS00850 glycoside hydrolase family 3 C-terminal domain-containing protein no 0.38
    14 LRK53_RS02890 glycosyltransferase no 0.37
    15 LRK53_RS05495 TonB-dependent receptor no 0.37
    16 LRK53_RS03825 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase no 0.36
    17 LRK53_RS00870 alpha-2-macroglobulin family protein no 0.36
    18 LRK53_RS01250 outer membrane protein transport protein no 0.36
    19 LRK53_RS02280 hypothetical protein no 0.35
    20 LRK53_RS08185 PadR family transcriptional regulator no 0.35

    Or look for negative cofitness