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  • Top cofit genes for LRK53_RS02640 from Rhodanobacter sp000427505 FW510-R12

    type I-F CRISPR-associated endonuclease Cas1f
    SEED: CRISPR-associated protein Cas1

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS14840 trypsin-like peptidase domain-containing protein no 0.47
    2 LRK53_RS06670 RIP metalloprotease RseP no 0.44
    3 LRK53_RS06720 CopD family protein no 0.44
    4 LRK53_RS13465 DNA mismatch repair endonuclease MutL no 0.43
    5 LRK53_RS09335 long-chain-fatty-acid--CoA ligase no 0.43
    6 LRK53_RS19155 hypothetical protein no 0.41
    7 LRK53_RS03625 ABC transporter ATP-binding protein no 0.40
    8 LRK53_RS15880 IS5 family transposase no 0.39
    9 LRK53_RS01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.38
    10 LRK53_RS00555 peroxiredoxin no 0.38
    11 LRK53_RS03495 alpha/beta fold hydrolase no 0.37
    12 LRK53_RS18225 DEAD/DEAH box helicase no 0.37
    13 LRK53_RS14755 carboxypeptidase regulatory-like domain-containing protein no 0.37
    14 LRK53_RS07325 peptidylprolyl isomerase no 0.37
    15 LRK53_RS12020 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein no 0.37
    16 LRK53_RS14905 chemotaxis response regulator protein-glutamate methylesterase no 0.37
    17 LRK53_RS03855 ATP-dependent DNA helicase DinG no 0.36
    18 LRK53_RS14345 DUF2165 domain-containing protein no 0.36
    19 LRK53_RS19120 hypothetical protein no 0.36
    20 LRK53_RS06520 c-type cytochrome no 0.36

    Or look for negative cofitness