• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for LRK53_RS01800 from Rhodanobacter sp000427505 FW510-R12

    UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
    SEED: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS05250 rubrerythrin family protein no 0.60
    2 LRK53_RS09730 ATP-dependent Clp protease ATP-binding subunit ClpA 0.66 0.58
    3 LRK53_RS13885 aminopeptidase no 0.56
    4 LRK53_RS06670 RIP metalloprotease RseP 0.68 0.55
    5 LRK53_RS12540 MFS transporter 0.65 0.54
    6 LRK53_RS05255 LysR substrate-binding domain-containing protein 0.80 0.54
    7 LRK53_RS14840 trypsin-like peptidase domain-containing protein 0.59 0.53
    8 LRK53_RS14740 helix-turn-helix domain-containing protein no 0.53
    9 LRK53_RS09385 hypothetical protein no 0.53
    10 LRK53_RS09995 hypothetical protein no 0.53
    11 LRK53_RS05470 hypothetical protein 0.39 0.53
    12 LRK53_RS05465 hemin uptake protein HemP no 0.52
    13 LRK53_RS11215 acetyl-CoA C-acyltransferase no 0.52
    14 LRK53_RS16010 hypothetical protein 0.44 0.52
    15 LRK53_RS09260 ABC transporter ATP-binding protein 0.61 0.50
    16 LRK53_RS10195 polyribonucleotide nucleotidyltransferase no 0.50
    17 LRK53_RS01420 hypothetical protein no 0.49
    18 LRK53_RS12670 efflux RND transporter periplasmic adaptor subunit no 0.49
    19 LRK53_RS09515 S46 family peptidase no 0.49
    20 LRK53_RS05525 ABC transporter permease no 0.48

    Or look for negative cofitness