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  • Top cofit genes for LRK53_RS01375 from Rhodanobacter sp000427505 FW510-R12

    pseudouridine synthase
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.36 0.55
    2 LRK53_RS17970 ParA family protein no 0.52
    3 LRK53_RS17175 SCO family protein no 0.51
    4 LRK53_RS09260 ABC transporter ATP-binding protein no 0.49
    5 LRK53_RS09335 long-chain-fatty-acid--CoA ligase no 0.47
    6 LRK53_RS14840 trypsin-like peptidase domain-containing protein no 0.46
    7 LRK53_RS07060 hypothetical protein no 0.46
    8 LRK53_RS19050 hypothetical protein no 0.46
    9 LRK53_RS09455 dicarboxylate/amino acid:cation symporter no 0.46
    10 LRK53_RS06670 RIP metalloprotease RseP 0.38 0.45
    11 LRK53_RS15750 dioxygenase no 0.45
    12 LRK53_RS09730 ATP-dependent Clp protease ATP-binding subunit ClpA 0.32 0.44
    13 LRK53_RS00315 ammonium transporter no 0.44
    14 LRK53_RS00470 GNAT family N-acetyltransferase no 0.43
    15 LRK53_RS13030 hypothetical protein no 0.43
    16 LRK53_RS03025 pimeloyl-ACP methyl ester esterase BioH no 0.43
    17 LRK53_RS06555 tetratricopeptide repeat protein no 0.43
    18 LRK53_RS12840 rRNA pseudouridine synthase no 0.42
    19 LRK53_RS04445 glycoside hydrolase family 99-like domain-containing protein no 0.42
    20 LRK53_RS05250 rubrerythrin family protein no 0.42

    Or look for negative cofitness