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  • Top cofit genes for LRK53_RS01375 from Rhodanobacter sp000427505 FW510-R12

    pseudouridine synthase
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 0.36 0.52
    2 LRK53_RS19050 hypothetical protein no 0.52
    3 LRK53_RS17175 SCO family protein no 0.51
    4 LRK53_RS07060 hypothetical protein no 0.49
    5 LRK53_RS15750 dioxygenase no 0.46
    6 LRK53_RS13030 hypothetical protein no 0.44
    7 LRK53_RS09335 long-chain-fatty-acid--CoA ligase 0.43 0.44
    8 LRK53_RS06555 tetratricopeptide repeat protein no 0.44
    9 LRK53_RS09260 ABC transporter ATP-binding protein 0.43 0.44
    10 LRK53_RS04125 ferritin-like domain-containing protein no 0.44
    11 LRK53_RS17970 ParA family protein no 0.43
    12 LRK53_RS08545 hypothetical protein no 0.43
    13 LRK53_RS11630 NAD-dependent epimerase no 0.43
    14 LRK53_RS06670 RIP metalloprotease RseP 0.37 0.43
    15 LRK53_RS09455 dicarboxylate/amino acid:cation symporter no 0.42
    16 LRK53_RS14840 trypsin-like peptidase domain-containing protein no 0.42
    17 LRK53_RS15015 flagellar biosynthesis protein FlhB no 0.42
    18 LRK53_RS01810 NAD(P)-dependent oxidoreductase no 0.42
    19 LRK53_RS12980 hypothetical protein no 0.41
    20 LRK53_RS00470 GNAT family N-acetyltransferase no 0.41

    Or look for negative cofitness