Top cofit genes for LRK53_RS00945 from Rhodanobacter sp000427505 FW510-R12

helix-turn-helix domain-containing protein
SEED: HigA protein (antitoxin to HigB)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	LRK53_RS03415		tRNA (cytidine(34)-2'-O)-methyltransferase	no	0.40
2	LRK53_RS05785		inositol-phosphate phosphatase	no	0.39
3	LRK53_RS01920		regulatory signaling modulator protein AmpE	no	0.38
4	LRK53_RS15835		MAPEG family protein	no	0.37
5	LRK53_RS18020		integron integrase	no	0.36
6	LRK53_RS14215		hypothetical protein	no	0.35
7	LRK53_RS04620		CPBP family intramembrane metalloprotease	no	0.34
8	LRK53_RS15345		lipopolysaccharide biosynthesis protein	no	0.34
9	LRK53_RS04270		c-type cytochrome	no	0.33
10	LRK53_RS07885		helix-turn-helix domain-containing protein	no	0.33
11	LRK53_RS15390		TIGR03088 family PEP-CTERM/XrtA system glycosyltransferase	no	0.32
12	LRK53_RS09560		D-amino acid dehydrogenase	no	0.32
13	LRK53_RS17270		cupredoxin domain-containing protein	no	0.32
14	LRK53_RS05270		polyhydroxyalkanoate depolymerase	no	0.32
15	LRK53_RS16290		division/cell wall cluster transcriptional repressor MraZ	no	0.31
16	LRK53_RS10250		2Fe-2S iron-sulfur cluster-binding protein	no	0.31
17	LRK53_RS01625		TlpA family protein disulfide reductase	no	0.31
18	LRK53_RS02595		efflux RND transporter permease subunit	no	0.31
19	LRK53_RS13385		methylcrotonoyl-CoA carboxylase	no	0.31
20	LRK53_RS02830		glutaminyl-peptide cyclotransferase	no	0.31

Or look for negative cofitness