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  • Top cofit genes for LRK53_RS00890 from Rhodanobacter sp000427505 FW510-R12

    efflux RND transporter permease subunit
    SEED: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS15955 PhzF family phenazine biosynthesis protein no 0.42
    2 LRK53_RS07120 DUF502 domain-containing protein no 0.40
    3 LRK53_RS13145 hypothetical protein no 0.38
    4 LRK53_RS03025 pimeloyl-ACP methyl ester esterase BioH no 0.37
    5 LRK53_RS18295 hypothetical protein no 0.36
    6 LRK53_RS02750 prepilin-type N-terminal cleavage/methylation domain-containing protein no 0.36
    7 LRK53_RS02745 GspH/FimT family pseudopilin no 0.36
    8 LRK53_RS02730 type II secretion system ATPase GspE no 0.34
    9 LRK53_RS18855 hypothetical protein no 0.34
    10 LRK53_RS03660 hypothetical protein no 0.34
    11 LRK53_RS10710 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein 0.25 0.34
    12 LRK53_RS00740 MarR family transcriptional regulator no 0.34
    13 LRK53_RS07045 response regulator no 0.33
    14 LRK53_RS11730 NADH-quinone oxidoreductase subunit C no 0.33
    15 LRK53_RS00880 TolC family protein 0.51 0.33
    16 LRK53_RS07965 aldo/keto reductase no 0.32
    17 LRK53_RS02785 ATP-dependent helicase HrpB no 0.32
    18 LRK53_RS05655 secondary thiamine-phosphate synthase enzyme YjbQ no 0.32
    19 LRK53_RS18055 pyrimidine dimer DNA glycosylase/endonuclease V no 0.32
    20 LRK53_RS16425 CoA transferase no 0.31

    Or look for negative cofitness