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  • Top cofit genes for LRK53_RS00875 from Rhodanobacter sp000427505 FW510-R12

    penicillin-binding protein 1C
    SEED: Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS16615 M20/M25/M40 family metallo-hydrolase no 0.40
    2 LRK53_RS08560 arylamine N-acetyltransferase no 0.39
    3 LRK53_RS08905 aminodeoxychorismate lyase no 0.37
    4 LRK53_RS00845 DEAD/DEAH box helicase no 0.36
    5 LRK53_RS16555 DUF559 domain-containing protein no 0.35
    6 LRK53_RS04940 M1 family metallopeptidase no 0.34
    7 LRK53_RS06530 mismatch-specific DNA-glycosylase no 0.34
    8 LRK53_RS16940 FHA domain-containing protein no 0.33
    9 LRK53_RS07325 peptidylprolyl isomerase no 0.33
    10 LRK53_RS15280 hypothetical protein no 0.33
    11 LRK53_RS03680 S53 family peptidase no 0.33
    12 LRK53_RS08060 copper resistance protein B no 0.33
    13 LRK53_RS14710 quinolinate synthase NadA no 0.32
    14 LRK53_RS04455 DUF6516 family protein no 0.31
    15 LRK53_RS01565 hypothetical protein no 0.31
    16 LRK53_RS15710 ribosome-associated translation inhibitor RaiA no 0.31
    17 LRK53_RS10130 sigma 54-interacting transcriptional regulator 0.60 0.31
    18 LRK53_RS03710 DEAD/DEAH box helicase no 0.31
    19 LRK53_RS17445 cysteine dioxygenase family protein no 0.31
    20 LRK53_RS15565 GFA family protein no 0.31

    Or look for negative cofitness