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  • Top cofit genes for LRK53_RS00735 from Rhodanobacter sp000427505 FW510-R12

    efflux transporter outer membrane subunit
    SEED: Outer membrane component of tripartite multidrug resistance system

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS10720 acyl-CoA dehydrogenase 0.26 0.52
    2 LRK53_RS03720 permease-like cell division protein FtsX 0.25 0.51
    3 LRK53_RS04585 phosphoenolpyruvate carboxykinase (GTP) no 0.47
    4 LRK53_RS14185 integrase no 0.46
    5 LRK53_RS03745 peptidoglycan DD-metalloendopeptidase family protein no 0.46
    6 LRK53_RS13165 alkyl hydroperoxide reductase no 0.45
    7 LRK53_RS13420 excinuclease ABC subunit UvrA no 0.45
    8 LRK53_RS14845 lytic transglycosylase domain-containing protein no 0.44
    9 LRK53_RS16685 type IV pilus secretin PilQ 0.27 0.43
    10 LRK53_RS07040 sensor histidine kinase 0.51 0.43
    11 LRK53_RS12505 IS1182 family transposase no 0.43
    12 LRK53_RS18725 tyrosine-type recombinase/integrase no 0.43
    13 LRK53_RS02250 phosphotransferase no 0.43
    14 LRK53_RS06050 nucleotidyltransferase domain-containing protein no 0.42
    15 LRK53_RS07820 pilus assembly protein PilY 0.49 0.41
    16 LRK53_RS00295 hypothetical protein no 0.41
    17 LRK53_RS03730 uracil-DNA glycosylase no 0.41
    18 LRK53_RS07205 TonB-dependent siderophore receptor 0.38 0.41
    19 LRK53_RS00730 efflux RND transporter periplasmic adaptor subunit 0.96 0.41
    20 LRK53_RS13595 polyphosphate kinase 1 0.31 0.40

    Or look for negative cofitness