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  • Top cofit genes for JDDGAC_26535 from Escherichia coli ECRC98

    fimD: PapC/FimD family outer membrane usher protein
    SEED: Fimbriae usher protein StfC

    Rank Hit Name Description Conserved? Cofitness  
    1 JDDGAC_11185 hcxA hydroxycarboxylate dehydrogenase HcxA no 0.49
    2 JDDGAC_27625 yehX glycine betaine ABC transporter ATP binding protein YehX no 0.42
    3 JDDGAC_22240 ebgC beta-galactosidase subunit beta no 0.41
    4 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.15 0.41
    5 JDDGAC_04240 ynbB Uncharacterized protein YnbB no 0.40
    6 JDDGAC_09145 Phage tail assembly chaperone proteins, E, or 41 or 14 no 0.40
    7 JDDGAC_14525 caiF carnitine metabolism transcriptional regulator CaiF no 0.39
    8 JDDGAC_28020 yehQ Protein YehQ 0.56 0.39
    9 JDDGAC_27285 yejO autotransporter YejO 0.38 0.38
    10 JDDGAC_02370 DUF1161 domain-containing protein no 0.38
    11 JDDGAC_23200 ygfX Inner membrane protein YgfX no 0.37
    12 JDDGAC_29310 amn AMP nucleosidase no 0.37
    13 JDDGAC_12280 phoA alkaline phosphatase no 0.37
    14 JDDGAC_09270 hypothetical protein no 0.36
    15 JDDGAC_19830 pqqL Insulinase (Peptidase family M16) 0.76 0.36
    16 JDDGAC_09135 phage tail protein no 0.36
    17 JDDGAC_09265 phage portal protein no 0.36
    18 JDDGAC_09130 putative baseplate hub protein 0.42 0.35
    19 JDDGAC_09280 Uncharacterized protein in GpA 5'region no 0.35
    20 JDDGAC_06740 potA spermidine/putrescine ABC transporter ATP-binding protein PotA no 0.35

    Or look for negative cofitness