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Cofit
Protein
Homologs
Top cofit genes for JDDGAC_23240 from
Escherichia coli ECRC98
yqfH
:
Protein YqfH
Rank
Hit
Name
Description
Conserved?
Cofitness
1
JDDGAC
_09940
lptB
LPS export ABC transporter ATP-binding protein
no
0.72
2
JDDGAC
_14730
creC
two-component system sensor histidine kinase CreC
no
0.71
3
JDDGAC
_17945
ysgA
Putative carboxymethylenebutenolidase
no
0.71
4
JDDGAC
_03675
lsrA
autoinducer 2 ABC transporter ATP-binding protein LsrA
no
0.70
5
JDDGAC
_13260
hypothetical protein
no
0.69
6
JDDGAC
_28860
phage N-6-adenine-methyltransferase
no
0.68
7
JDDGAC
_19765
Type I toxin-antitoxin system toxin Ldr family protein
no
0.67
8
JDDGAC
_14680
yaaJ
Uncharacterized transporter YaaJ
no
0.66
9
JDDGAC
_24545
ygaV
putative HTH-type transcriptional regulator YgaV
no
0.66
10
JDDGAC
_18145
yifK
amino acid permease
no
0.66
11
JDDGAC
_12830
rpmE2-1
type B 50S ribosomal protein L31
no
0.66
12
JDDGAC
_27745
Replication protein
no
0.66
13
JDDGAC
_26905
menH
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase
no
0.65
14
JDDGAC
_09885
ybiI
C4-type zinc finger protein YbiI
no
0.64
15
JDDGAC
_04325
peptidase M85
no
0.64
16
JDDGAC
_12230
hypothetical protein
no
0.63
17
JDDGAC
_18595
toxin
no
0.63
18
JDDGAC
_13320
gpt
xanthine phosphoribosyltransferase
no
0.63
19
JDDGAC
_13365
lfhA
Putative truncated flagellar export/assembly protein LfhA
no
0.63
20
JDDGAC
_07640
DNA-binding protein
no
0.62
Or look for
negative cofitness