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Cofit
Protein
Homologs
Top cofit genes for JDDGAC_21835 from
Escherichia coli ECRC98
yraQ
:
UPF0718 protein YraQ
SEED: FIG006303: protein yraQ
Rank
Hit
Name
Description
Conserved?
Cofitness
1
JDDGAC
_15985
frdB
fumarate reductase iron-sulfur protein
0.52
0.81
2
JDDGAC
_07310
flgG
flagellar basal-body rod protein FlgG
no
0.81
3
JDDGAC
_23430
escR
EscR/YscR/HrcR family type III secretion system export apparatus protein
no
0.81
4
JDDGAC
_14515
caiD
crotonobetainyl-CoA hydratase
0.31
0.80
5
JDDGAC
_17350
cytR
DNA-binding transcriptional regulator CytR
no
0.79
6
JDDGAC
_18815
uhpC
MFS transporter family glucose-6-phosphate receptor UhpC
no
0.79
7
JDDGAC
_11240
fepG
iron-enterobactin ABC transporter permease
no
0.79
8
JDDGAC
_26930
arnF
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
0.59
0.78
9
JDDGAC
_03655
lsrF
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
no
0.77
10
JDDGAC
_11845
acrR
multidrug efflux transporter transcriptional repressor AcrR
no
0.77
11
JDDGAC
_21620
mlaC
phospholipid-binding protein MlaC
0.36
0.76
12
JDDGAC
_12090
pgpA
phosphatidylglycerophosphatase A
no
0.76
13
JDDGAC
_17970
pldB
lysophospholipase L2
no
0.76
14
JDDGAC
_09670
deoR
DNA-binding transcriptional repressor DeoR
no
0.76
15
JDDGAC
_09800
ldtB
L,D-transpeptidase
no
0.75
16
JDDGAC
_01275
cdgI
putative diguanylate cyclase CdgI
no
0.75
17
JDDGAC
_21545
npr
PTS phosphocarrier protein NPr
no
0.75
18
JDDGAC
_18675
cbrA
colicin M resistance protein
no
0.74
19
JDDGAC
_23315
arcC
carbamate kinase
no
0.74
20
JDDGAC
_16410
Uncharacterized protein YjcO
0.40
0.74
Or look for
negative cofitness