Top cofit genes for JDDGAC_09800 from Escherichia coli ECRC98

ldtB: L,D-transpeptidase
SEED: L,D-transpeptidase YbiS

Rank	Hit	Name	Description	Conserved?	Cofitness
1	JDDGAC_25060	rseC	SoxR-reducing system protein RseC	no	0.97
2	JDDGAC_07130	mfd	transcription-repair coupling factor	0.92	0.96
3	JDDGAC_26930	arnF	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF	0.70	0.96
4	JDDGAC_13040		GIY-YIG domain-containing protein	0.66	0.96
5	JDDGAC_21615	mlaC	phospholipid-binding protein MlaC	0.78	0.95
6	JDDGAC_21610	mlaD	outer membrane lipid asymmetry maintenance protein MlaD	0.77	0.94
7	JDDGAC_26495	mlaA	phospholipid-binding lipoprotein MlaA	0.76	0.94
8	JDDGAC_01860	lpp	murein lipoprotein Lpp	0.83	0.94
9	JDDGAC_21670	greA	transcription elongation factor GreA	0.87	0.94
10	JDDGAC_21600	mlaF	phospholipid ABC transporter ATP-binding protein MlaF	0.81	0.94
11	JDDGAC_27165	apbE	FAD:protein FMN transferase ApbE	0.64	0.93
12	JDDGAC_21605	mlaE	lipid asymmetry maintenance ABC transporter permease subunit MlaE	0.83	0.93
13	JDDGAC_27130	rcsC	two-component system sensor histidine kinase RcsC	0.70	0.93
14	JDDGAC_17970	pldB	lysophospholipase L2	0.25	0.93
15	JDDGAC_18400	mioC	FMN-binding protein MioC	0.94	0.93
16	JDDGAC_13920	mrcB	bifunctional glycosyl transferase/transpeptidase	no	0.93
17	JDDGAC_26940	arnT	lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase	0.84	0.92
18	JDDGAC_22340	bacA	undecaprenyl-diphosphate phosphatase	0.78	0.92
19	JDDGAC_01040	prc	carboxy terminal-processing peptidase	0.68	0.92
20	JDDGAC_21190	yrdB	Uncharacterized protein YrdB	no	0.92

Or look for negative cofitness