Private Fitness
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Gene
Fitness
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Cofit
Protein
Homologs
Top cofit genes for JDDGAC_00600 from
Escherichia coli ECRC98
xerD
:
integrase
SEED: Integrase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
JDDGAC
_29405
DUF1627 domain-containing protein
no
0.87
2
JDDGAC
_08160
pgaC
poly-beta-1,6-N-acetyl-D-glucosamine synthase
no
0.80
3
JDDGAC
_16890
aceA
isocitrate lyase
no
0.77
4
JDDGAC
_19990
dctR
HTH-type transcriptional regulator DctR
no
0.77
5
JDDGAC
_07990
hypothetical protein
no
0.77
6
JDDGAC
_18985
escV
type III secretion system LEE export apparatus protein EscV
no
0.77
7
JDDGAC
_20860
argD,dapC
bifunctional acetylornithine/succinyldiaminopimelate transaminase
0.53
0.77
8
JDDGAC
_20395
Tetratricopeptide repeat protein
no
0.75
9
JDDGAC
_09480
poxB
ubiquinone-dependent pyruvate dehydrogenase
no
0.75
10
JDDGAC
_03230
Ead/Ea22-like protein
no
0.72
11
JDDGAC
_11700
adhesin
no
0.72
12
JDDGAC
_24365
pncC
nicotinamide-nucleotide amidase
no
0.72
13
JDDGAC
_19530
yesN
AraC family transcriptional regulator
0.28
0.72
14
JDDGAC
_25660
hypothetical protein
no
0.72
15
JDDGAC
_25285
trmJ
tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ
no
0.71
16
JDDGAC
_07565
antitoxin
no
0.71
17
JDDGAC
_22620
yqhA
UPF0114 protein YqhA
no
0.71
18
JDDGAC
_26455
Replication protein
no
0.71
19
JDDGAC
_30050
ssb
single-stranded DNA-binding protein
no
0.70
20
JDDGAC
_19755
yhjV
Inner membrane transport protein YhjV
no
0.70
Or look for
negative cofitness