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Cofit
Protein
Homologs
Top cofit genes for IAI46_03910 from
Serratia liquefaciens MT49
inner membrane protein YpjD
SEED: CcsA-related protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI46
_19865
MFS transporter
no
0.64
2
IAI46
_04835
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
0.62
0.62
3
IAI46
_19460
two-component system response regulator GlrR
no
0.61
4
IAI46
_09865
SDR family oxidoreductase
no
0.57
5
IAI46
_00630
lipid III flippase WzxE
0.48
0.57
6
IAI46
_15195
helix-turn-helix domain-containing protein
no
0.55
7
IAI46
_06970
substrate-binding domain-containing protein
no
0.55
8
IAI46
_24615
HTH domain-containing protein
no
0.55
9
IAI46
_22695
AsmA2 domain-containing protein YhdP
0.65
0.54
10
IAI46
_16805
hypothetical protein
no
0.54
11
IAI46
_21215
tRNA glutamyl-Q(34) synthetase GluQRS
0.40
0.53
12
IAI46
_01880
transcription elongation factor GreA
0.78
0.53
13
IAI46
_08435
DUF3300 domain-containing protein
no
0.53
14
IAI46
_07030
serine protein kinase RIO
0.62
0.52
15
IAI46
_17450
transcriptional regulator RcsB
0.35
0.52
16
IAI46
_24855
YicC family protein
0.85
0.52
17
IAI46
_17815
colicin V production protein
0.31
0.51
18
IAI46
_11530
oxidoreductase
no
0.51
19
IAI46
_05495
fimbrial protein
no
0.49
20
IAI46
_05655
AlpA family transcriptional regulator
no
0.49
Or look for
negative cofitness