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Cofit
Protein
Homologs
Top cofit genes for IAI46_03210 from
Serratia liquefaciens MT49
LysE family translocator
SEED: Threonine efflux protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI46
_13200
sugar ABC transporter permease
no
0.57
2
IAI46
_21395
YqgE/AlgH family protein
no
0.57
3
IAI46
_19125
GntR family transcriptional regulator
no
0.56
4
IAI46
_17235
1-phosphofructokinase
no
0.55
5
IAI46
_07755
fimbrial protein
no
0.54
6
IAI46
_12300
ABC transporter ATP-binding protein
no
0.52
7
IAI46
_21135
agmatinase
no
0.52
8
IAI46
_04275
allantoate amidohydrolase
no
0.52
9
IAI46
_20850
aminomethyl-transferring glycine dehydrogenase
no
0.52
10
IAI46
_12665
aldehyde dehydrogenase family protein
no
0.52
11
IAI46
_12865
myo-inosose-2 dehydratase
no
0.52
12
IAI46
_17680
NADH-quinone oxidoreductase subunit NuoH
no
0.51
13
IAI46
_09200
DUF2594 family protein
no
0.51
14
IAI46
_13470
transcriptional regulator TyrR
no
0.51
15
IAI46
_20875
Xaa-Pro aminopeptidase
0.28
0.51
16
IAI46
_07740
type 1 fimbrial protein
no
0.50
17
IAI46
_22470
RNA polymerase factor sigma-54
no
0.50
18
IAI46
_20995
small-conductance mechanosensitive channel MscS
no
0.50
19
IAI46
_22575
metalloprotease PmbA
0.19
0.50
20
IAI46
_06670
type 1 fimbrial protein
no
0.49
Or look for
negative cofitness