Top cofit genes for HMPREF1181_RS16440 from Bacteroides stercoris CC31F

YqgE/AlgH family protein
SEED: Transcriptional regulator, ArsR family
KEGG: putative transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1181_RS08870		DUF3874 domain-containing protein	no	0.75
2	HMPREF1181_RS08065		response regulator	no	0.75
3	HMPREF1181_RS02905		DUF4010 domain-containing protein	no	0.73
4	HMPREF1181_RS11245		TlpA family protein disulfide reductase	no	0.73
5	HMPREF1181_RS10560		sirohydrochlorin cobaltochelatase	no	0.72
6	HMPREF1181_RS01710		tRNA pseudouridine(55) synthase TruB	0.65	0.71
7	HMPREF1181_RS18115		leucine-rich repeat protein	no	0.70
8	HMPREF1181_RS00200		MATE family efflux transporter	0.52	0.70
9	HMPREF1181_RS08175		hypothetical protein	no	0.69
10	HMPREF1181_RS00015		hypothetical protein	no	0.69
11	HMPREF1181_RS02160		hydrogen peroxide-inducible genes activator	0.64	0.69
12	HMPREF1181_RS02830		alpha-L-fucosidase	no	0.69
13	HMPREF1181_RS00290		family 20 glycosylhydrolase	no	0.69
14	HMPREF1181_RS16455		recombination protein RecR	0.51	0.69
15	HMPREF1181_RS09625		hypothetical protein	no	0.68
16	HMPREF1181_RS11770		HAMP domain-containing histidine kinase	no	0.68
17	HMPREF1181_RS03935		UpxY family transcription antiterminator	no	0.67
18	HMPREF1181_RS09285		hypothetical protein	no	0.67
19	HMPREF1181_RS04005		hypothetical protein	no	0.67
20	HMPREF1181_RS03080		RagB/SusD family nutrient uptake outer membrane protein	no	0.66

Or look for negative cofitness