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Cofit
Top cofit genes for HMPREF1181_RS14490 from
Bacteroides stercoris CC31F
Abi family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS14500
TetR/AcrR family transcriptional regulator
no
0.59
2
HMPREF1181
_RS01745
choice-of-anchor J domain-containing protein
no
0.58
3
HMPREF1181
_RS14285
efflux RND transporter periplasmic adaptor subunit
no
0.53
4
HMPREF1181
_RS16215
MATE family efflux transporter
no
0.52
5
HMPREF1181
_RS16035
diaminopimelate epimerase
no
0.49
6
HMPREF1181
_RS14730
flavodoxin family protein
no
0.48
7
HMPREF1181
_RS15745
DUF4134 domain-containing protein
no
0.47
8
HMPREF1181
_RS14315
hypothetical protein
no
0.46
9
HMPREF1181
_RS07670
DUF4062 domain-containing protein
no
0.46
10
HMPREF1181
_RS07610
OmpA family protein
no
0.45
11
HMPREF1181
_RS07685
helix-turn-helix domain-containing protein
no
0.45
12
HMPREF1181
_RS13190
hypothetical protein
no
0.45
13
HMPREF1181
_RS15220
phenylacetate--CoA ligase
no
0.44
14
HMPREF1181
_RS05355
fructose-6-phosphate aldolase
no
0.44
15
HMPREF1181
_RS11035
type II restriction endonuclease
no
0.44
16
HMPREF1181
_RS14580
BamA/TamA family outer membrane protein
no
0.44
17
HMPREF1181
_RS00695
cob(I)yrinic acid a,c-diamide adenosyltransferase
no
0.43
18
HMPREF1181
_RS04900
RNA polymerase sigma-70 factor
no
0.43
19
HMPREF1181
_RS17100
site-specific integrase
no
0.43
20
HMPREF1181
_RS12215
DUF4373 domain-containing protein
no
0.42
Or look for
negative cofitness