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Cofit
Top cofit genes for HMPREF1181_RS14305 from
Bacteroides stercoris CC31F
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS12065
hypothetical protein
no
0.41
2
HMPREF1181
_RS10620
YkgB family protein
no
0.41
3
HMPREF1181
_RS07680
helix-turn-helix domain-containing protein
no
0.41
4
HMPREF1181
_RS06010
MFS transporter
no
0.39
5
HMPREF1181
_RS11395
RteC domain-containing protein
no
0.38
6
HMPREF1181
_RS11475
ParA family protein
no
0.37
7
HMPREF1181
_RS14395
FHA domain-containing protein
no
0.37
8
HMPREF1181
_RS07320
hypothetical protein
no
0.35
9
HMPREF1181
_RS10025
leucine-rich repeat protein
no
0.35
10
HMPREF1181
_RS13350
flotillin-like protein FloA
no
0.35
11
HMPREF1181
_RS08125
helix-turn-helix domain-containing protein
no
0.34
12
HMPREF1181
_RS14270
Nif3-like dinuclear metal center hexameric protein
no
0.34
13
HMPREF1181
_RS09915
type IA DNA topoisomerase
no
0.34
14
HMPREF1181
_RS03710
RNA-binding protein
no
0.34
15
HMPREF1181
_RS02175
DEAD/DEAH box helicase
no
0.34
16
HMPREF1181
_RS00020
mechanosensitive ion channel
no
0.33
17
HMPREF1181
_RS04065
prolyl oligopeptidase family serine peptidase
no
0.33
18
HMPREF1181
_RS11250
aspartate ammonia-lyase
no
0.33
19
HMPREF1181
_RS05920
3'-5' exonuclease domain-containing protein 2
no
0.33
20
HMPREF1181
_RS03520
glycoside hydrolase family 88 protein
no
0.32
Or look for
negative cofitness