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Cofit
Protein
Homologs
Top cofit genes for HMPREF1181_RS11600 from
Bacteroides stercoris CC31F
RNA polymerase subunit sigma-70
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS17990
smalltalk protein
no
0.62
2
HMPREF1181
_RS02890
hypothetical protein
no
0.61
3
HMPREF1181
_RS07545
hypothetical protein
no
0.61
4
HMPREF1181
_RS11795
HU family DNA-binding protein
no
0.60
5
HMPREF1181
_RS09600
hypothetical protein
no
0.59
6
HMPREF1181
_RS08675
hypothetical protein
no
0.59
7
HMPREF1181
_RS12750
TetR/AcrR family transcriptional regulator
no
0.58
8
HMPREF1181
_RS11560
DUF3873 domain-containing protein
no
0.58
9
HMPREF1181
_RS00250
TIGR04076 family protein
no
0.57
10
HMPREF1181
_RS16515
Fic family protein
no
0.57
11
HMPREF1181
_RS14520
hypothetical protein
no
0.57
12
HMPREF1181
_RS16830
HpaII family restriction endonuclease
no
0.57
13
HMPREF1181
_RS11460
YWFCY domain-containing protein
no
0.56
14
HMPREF1181
_RS03515
lactaldehyde reductase
no
0.56
15
HMPREF1181
_RS10955
ferritin
no
0.56
16
HMPREF1181
_RS08465
DUF3874 domain-containing protein
no
0.56
17
HMPREF1181
_RS10405
hypothetical protein
no
0.56
18
HMPREF1181
_RS11485
hypothetical protein
no
0.55
19
HMPREF1181
_RS11590
DEAD/DEAH box helicase family protein
no
0.55
20
HMPREF1181
_RS13720
hypothetical protein
no
0.55
Or look for
negative cofitness