Top cofit genes for HMPREF1181_RS11580 from Bacteroides stercoris CC31F

site-specific integrase
SEED: Integrase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1181_RS13595		hypothetical protein	no	0.66
2	HMPREF1181_RS12415		SDR family oxidoreductase	no	0.66
3	HMPREF1181_RS16050		glutamate synthase subunit beta	no	0.66
4	HMPREF1181_RS13190		hypothetical protein	no	0.65
5	HMPREF1181_RS18050		hypothetical protein	no	0.63
6	HMPREF1181_RS15895		ATP-binding protein	no	0.62
7	HMPREF1181_RS11595		DUF3307 domain-containing protein	no	0.62
8	HMPREF1181_RS11195		hypothetical protein	no	0.62
9	HMPREF1181_RS13435		ATP-binding protein	no	0.61
10	HMPREF1181_RS11115		AraC family transcriptional regulator	no	0.61
11	HMPREF1181_RS00710		helix-turn-helix transcriptional regulator	no	0.60
12	HMPREF1181_RS06840		Gfo/Idh/MocA family oxidoreductase	no	0.59
13	HMPREF1181_RS10285		DUF4099 domain-containing protein	no	0.59
14	HMPREF1181_RS10135		helix-turn-helix domain-containing protein	no	0.58
15	HMPREF1181_RS07535		HU family DNA-binding protein	no	0.58
16	HMPREF1181_RS14690		2-iminoacetate synthase ThiH	no	0.58
17	HMPREF1181_RS14470		helix-turn-helix transcriptional regulator	no	0.58
18	HMPREF1181_RS06535		peroxide stress protein YaaA	no	0.58
19	HMPREF1181_RS02065		hypothetical protein	no	0.57
20	HMPREF1181_RS12575		porin family protein	no	0.57

Or look for negative cofitness