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Cofit
Protein
Homologs
Top cofit genes for HMPREF1181_RS09580 from
Bacteroides stercoris CC31F
AI-2E family transporter
SEED: Transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS02485
glycosyltransferase family 8 protein
no
0.56
2
HMPREF1181
_RS14265
ABC transporter permease
0.21
0.50
3
HMPREF1181
_RS10205
hypothetical protein
no
0.50
4
HMPREF1181
_RS04960
DMP19 family protein
no
0.46
5
HMPREF1181
_RS10665
NAD(+) diphosphatase
no
0.46
6
HMPREF1181
_RS01235
class I SAM-dependent methyltransferase
no
0.46
7
HMPREF1181
_RS10130
ROK family transcriptional regulator
no
0.45
8
HMPREF1181
_RS09890
hypothetical protein
no
0.44
9
HMPREF1181
_RS05855
hypothetical protein
no
0.44
10
HMPREF1181
_RS09605
hypothetical protein
no
0.43
11
HMPREF1181
_RS08540
galactose-1-epimerase
0.58
0.43
12
HMPREF1181
_RS11610
helix-turn-helix domain-containing protein
no
0.42
13
HMPREF1181
_RS00710
helix-turn-helix transcriptional regulator
no
0.41
14
HMPREF1181
_RS08085
efflux RND transporter periplasmic adaptor subunit
0.37
0.41
15
HMPREF1181
_RS06970
translation initiation factor
no
0.41
16
HMPREF1181
_RS08445
RagB/SusD family nutrient uptake outer membrane protein
no
0.40
17
HMPREF1181
_RS17305
site-specific integrase
no
0.40
18
HMPREF1181
_RS04085
discoidin domain-containing protein
no
0.40
19
HMPREF1181
_RS09990
hypothetical protein
no
0.40
20
HMPREF1181
_RS16150
GxxExxY protein
no
0.39
Or look for
negative cofitness