Top cofit genes for HMPREF1181_RS05940 from Bacteroides stercoris CC31F

16S rRNA (uracil(1498)-N(3))-methyltransferase
SEED: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase E

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1181_RS01680		histidine-type phosphatase	no	0.67
2	HMPREF1181_RS06295		hypothetical protein	no	0.63
3	HMPREF1181_RS09240		DUF3822 family protein	no	0.61
4	HMPREF1181_RS05545		maltose phosphorylase	no	0.61
5	HMPREF1181_RS05585		peptide chain release factor 3	0.44	0.60
6	HMPREF1181_RS01990		2-dehydropantoate 2-reductase	no	0.59
7	HMPREF1181_RS06050		RNA polymerase sigma-70 factor	no	0.58
8	HMPREF1181_RS10265		DUF1273 family protein	no	0.58
9	HMPREF1181_RS01340		FKBP-type peptidyl-prolyl cis-trans isomerase	0.57	0.57
10	HMPREF1181_RS06780		TonB-dependent receptor	0.41	0.56
11	HMPREF1181_RS04675		1-acyl-sn-glycerol-3-phosphate acyltransferase	no	0.54
12	HMPREF1181_RS13645		DEAD/DEAH box helicase family protein	no	0.54
13	HMPREF1181_RS13930		copper homeostasis protein CutC	0.68	0.54
14	HMPREF1181_RS16625		hypothetical protein	no	0.53
15	HMPREF1181_RS05935		bifunctional nuclease family protein	0.58	0.53
16	HMPREF1181_RS12210		DUF4373 domain-containing protein	no	0.52
17	HMPREF1181_RS13295		DUF4199 domain-containing protein	no	0.52
18	HMPREF1181_RS10420		hypothetical protein	no	0.52
19	HMPREF1181_RS12520		glucose-6-phosphate dehydrogenase	0.57	0.51
20	HMPREF1181_RS06490		DUF4827 domain-containing protein	0.52	0.51

Or look for negative cofitness