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Cofit
Protein
Homologs
Top cofit genes for HMPREF1181_RS04975 from
Bacteroides stercoris CC31F
GGGtGRT protein
SEED: no significant homology.
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS04970
nitrogen-fixing protein NifU
0.97
0.85
2
HMPREF1181
_RS09085
ATP-binding protein
no
0.81
3
HMPREF1181
_RS05805
type III pantothenate kinase
0.76
0.80
4
HMPREF1181
_RS03185
LrgB family protein
no
0.79
5
HMPREF1181
_RS04120
UpxY family transcription antiterminator
no
0.78
6
HMPREF1181
_RS08275
6-phosphofructokinase
0.58
0.78
7
HMPREF1181
_RS03430
AMP-binding protein
no
0.77
8
HMPREF1181
_RS04410
UpxZ family transcription anti-terminator antagonist
no
0.77
9
HMPREF1181
_RS08065
response regulator
no
0.76
10
HMPREF1181
_RS05875
30S ribosomal protein S1
no
0.76
11
HMPREF1181
_RS10765
FAD-dependent oxidoreductase
no
0.76
12
HMPREF1181
_RS13805
histone H1
no
0.76
13
HMPREF1181
_RS13230
sodium ion-translocating decarboxylase subunit beta
no
0.75
14
HMPREF1181
_RS01730
class I SAM-dependent methyltransferase
no
0.75
15
HMPREF1181
_RS02905
DUF4010 domain-containing protein
no
0.75
16
HMPREF1181
_RS09150
ribosome silencing factor
no
0.75
17
HMPREF1181
_RS07465
RNA-binding protein
no
0.74
18
HMPREF1181
_RS09625
hypothetical protein
no
0.74
19
HMPREF1181
_RS03425
acyloxyacyl hydrolase
no
0.74
20
HMPREF1181
_RS06440
radical SAM family heme chaperone HemW
0.74
0.74
Or look for
negative cofitness