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Cofit
Protein
Homologs
Top cofit genes for HMPREF1181_RS04540 from
Bacteroides stercoris CC31F
NADH peroxidase
SEED: Rubrerythrin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS11555
hypothetical protein
no
0.72
2
HMPREF1181
_RS14330
hypothetical protein
no
0.67
3
HMPREF1181
_RS15725
helix-turn-helix domain-containing protein
no
0.66
4
HMPREF1181
_RS06430
AI-2E family transporter
no
0.65
5
HMPREF1181
_RS16300
site-specific integrase
no
0.65
6
HMPREF1181
_RS06140
large-conductance mechanosensitive channel protein MscL
no
0.65
7
HMPREF1181
_RS11375
AraC family transcriptional regulator
no
0.64
8
HMPREF1181
_RS09710
TraG family conjugative transposon ATPase
no
0.64
9
HMPREF1181
_RS17660
GNAT family N-acetyltransferase
no
0.64
10
HMPREF1181
_RS06915
exodeoxyribonuclease VII small subunit
no
0.63
11
HMPREF1181
_RS13425
SocA family protein
no
0.63
12
HMPREF1181
_RS13890
6-carboxytetrahydropterin synthase QueD
no
0.63
13
HMPREF1181
_RS01175
nitroreductase
no
0.63
14
HMPREF1181
_RS05180
DNA adenine methylase
no
0.62
15
HMPREF1181
_RS12415
SDR family oxidoreductase
no
0.61
16
HMPREF1181
_RS02620
lysine exporter LysO family protein
no
0.61
17
HMPREF1181
_RS05885
hypothetical protein
0.61
0.61
18
HMPREF1181
_RS09990
hypothetical protein
no
0.61
19
HMPREF1181
_RS12030
hypothetical protein
no
0.61
20
HMPREF1181
_RS16255
PepSY-like domain-containing protein
no
0.61
Or look for
negative cofitness