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Cofit
Protein
Homologs
Top cofit genes for HMPREF1181_RS02635 from
Bacteroides stercoris CC31F
helix-turn-helix transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS10850
DUF308 domain-containing protein
no
0.53
2
HMPREF1181
_RS12845
IS21-like element helper ATPase IstB
no
0.51
3
HMPREF1181
_RS15475
AhpC/TSA family protein
no
0.49
4
HMPREF1181
_RS00985
efflux RND transporter permease subunit
no
0.48
5
HMPREF1181
_RS08905
RagB/SusD family nutrient uptake outer membrane protein
no
0.48
6
HMPREF1181
_RS09460
TolC family protein
no
0.47
7
HMPREF1181
_RS12485
ABC transporter permease
no
0.47
8
HMPREF1181
_RS14045
glycoside hydrolase family 9 protein
no
0.47
9
HMPREF1181
_RS16300
site-specific integrase
no
0.46
10
HMPREF1181
_RS03095
TonB-dependent receptor
no
0.46
11
HMPREF1181
_RS02665
hypothetical protein
no
0.45
12
HMPREF1181
_RS11420
DUF3945 domain-containing protein
no
0.45
13
HMPREF1181
_RS01845
hypothetical protein
no
0.45
14
HMPREF1181
_RS01030
RagB/SusD family nutrient uptake outer membrane protein
no
0.44
15
HMPREF1181
_RS12480
ABC transporter ATP-binding protein
no
0.44
16
HMPREF1181
_RS18150
hypothetical protein
no
0.44
17
HMPREF1181
_RS00930
hypothetical protein
no
0.43
18
HMPREF1181
_RS06115
glycogen debranching enzyme N-terminal domain-containing protein
no
0.42
19
HMPREF1181
_RS00045
type II toxin-antitoxin system RelE/ParE family toxin
no
0.42
20
HMPREF1181
_RS14720
AraC family transcriptional regulator
no
0.42
Or look for
negative cofitness