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Cofit
Protein
Homologs
Top cofit genes for HMPREF1181_RS01875 from
Bacteroides stercoris CC31F
DUF5003 domain-containing protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1181
_RS01870
DUF4458 domain-containing protein
no
0.98
2
HMPREF1181
_RS01865
hypothetical protein
no
0.98
3
HMPREF1181
_RS01860
S8 family serine peptidase
no
0.96
4
HMPREF1181
_RS01880
DUF4929 family protein
no
0.96
5
HMPREF1181
_RS01890
TonB-dependent receptor
no
0.94
6
HMPREF1181
_RS01885
RagB/SusD family nutrient uptake outer membrane protein
no
0.93
7
HMPREF1181
_RS01345
Lrp/AsnC ligand binding domain-containing protein
no
0.79
8
HMPREF1181
_RS12460
cytochrome ubiquinol oxidase subunit I
no
0.70
9
HMPREF1181
_RS12520
glucose-6-phosphate dehydrogenase
no
0.69
10
HMPREF1181
_RS12465
DUF4492 domain-containing protein
no
0.67
11
HMPREF1181
_RS00835
SusD/RagB family nutrient-binding outer membrane lipoprotein
no
0.67
12
HMPREF1181
_RS05935
bifunctional nuclease family protein
no
0.65
13
HMPREF1181
_RS12525
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
0.55
0.62
14
HMPREF1181
_RS08800
SAM-dependent methyltransferase
no
0.62
15
HMPREF1181
_RS07320
hypothetical protein
no
0.61
16
HMPREF1181
_RS12210
DUF4373 domain-containing protein
no
0.61
17
HMPREF1181
_RS14175
tRNA (guanosine(37)-N1)-methyltransferase TrmD
no
0.61
18
HMPREF1181
_RS00830
TonB-dependent receptor
no
0.60
19
HMPREF1181
_RS13295
DUF4199 domain-containing protein
0.54
0.58
20
HMPREF1181
_RS16505
UvrD-helicase domain-containing protein
no
0.56
Or look for
negative cofitness