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Cofit
Protein
Homologs
Top cofit genes for HGI48_RS04550 from
Dickeya dianthicola 67-19
alpha/beta hydrolase
SEED: FIG00613686: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HGI48
_RS21060
sugar ABC transporter permease
no
0.68
2
HGI48
_RS01300
50S ribosomal protein L11 methyltransferase
no
0.67
3
HGI48
_RS11145
hypothetical protein
0.36
0.61
4
HGI48
_RS14120
efflux RND transporter permease subunit
no
0.60
5
HGI48
_RS16800
glycine betaine/L-proline ABC transporter ATP-binding protein ProV
no
0.60
6
HGI48
_RS03785
nucleoside recognition family protein
no
0.58
7
HGI48
_RS12460
transcriptional regulator TyrR
no
0.57
8
HGI48
_RS15715
polysaccharide lyase
no
0.57
9
HGI48
_RS07750
ABC transporter ATP-binding protein
no
0.56
10
HGI48
_RS05525
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
no
0.56
11
HGI48
_RS05965
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
no
0.56
12
HGI48
_RS02510
GntR family transcriptional regulator
no
0.55
13
HGI48
_RS15725
pectinesterase A
no
0.55
14
HGI48
_RS00990
Trk system potassium transporter TrkH
no
0.54
15
HGI48
_RS16305
glutamate--cysteine ligase
no
0.54
16
HGI48
_RS11400
carbohydrate ABC transporter substrate-binding protein
no
0.54
17
HGI48
_RS12430
thiol peroxidase
no
0.54
18
HGI48
_RS18890
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
no
0.54
19
HGI48
_RS12920
cell division protein ZapC
no
0.53
20
HGI48
_RS11055
SDR family oxidoreductase
no
0.53
Or look for
negative cofitness