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Cofit
Top cofit genes for HGI48_RS03470 from
Dickeya dianthicola 67-19
tRNA-Gly
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HGI48
_RS07135
lytic transglycosylase domain-containing protein
no
0.61
2
HGI48
_RS00775
divergent polysaccharide deacetylase family protein
no
0.56
3
HGI48
_RS09440
DNA-binding transcriptional repressor DeoR
no
0.55
4
HGI48
_RS12030
NarK family nitrate/nitrite MFS transporter
no
0.54
5
HGI48
_RS19725
GMP/IMP nucleotidase
no
0.53
6
HGI48
_RS09430
alpha/beta hydrolase
no
0.50
7
HGI48
_RS09040
SDR family NAD(P)-dependent oxidoreductase
no
0.50
8
HGI48
_RS13355
hypothetical protein
no
0.50
9
HGI48
_RS05970
1,4-dihydroxy-2-naphthoyl-CoA synthase
no
0.50
10
HGI48
_RS03690
YnfC family lipoprotein
no
0.50
11
HGI48
_RS19685
DNA uptake porin HofQ
no
0.50
12
HGI48
_RS07080
type IV secretory system conjugative DNA transfer family protein
no
0.49
13
HGI48
_RS17110
MFS transporter
no
0.49
14
HGI48
_RS15955
carbohydrate porin
no
0.48
15
HGI48
_RS04130
transposase
no
0.48
16
HGI48
_RS21490
hydroxymyristoyl-ACP dehydratase
no
0.48
17
HGI48
_RS02270
IclR family transcriptional regulator
no
0.48
18
HGI48
_RS06260
glutamate/aspartate ABC transporter permease GltK
no
0.48
19
HGI48
_RS15195
HAAAP family serine/threonine permease
no
0.48
20
HGI48
_RS17515
alkaline phosphatase family protein
no
0.47
Or look for
negative cofitness