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Cofit
Protein
Homologs
Top cofit genes for HGI48_RS00840 from
Dickeya dianthicola 67-19
SocA family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HGI48
_RS02690
anaerobic C4-dicarboxylate transporter
no
0.51
2
HGI48
_RS20120
adenylosuccinate lyase
no
0.45
3
HGI48
_RS02940
phosphoadenosine phosphosulfate reductase family protein
no
0.43
4
HGI48
_RS20280
hypothetical protein
no
0.43
5
HGI48
_RS18125
acetolactate synthase small subunit
no
0.42
6
HGI48
_RS01780
aminoimidazole riboside kinase
no
0.42
7
HGI48
_RS12155
baseplate assembly protein
no
0.42
8
HGI48
_RS06060
HTH-type transcriptional regulator GalS
no
0.41
9
HGI48
_RS07470
phosphonate C-P lyase system protein PhnK
no
0.40
10
HGI48
_RS07725
MetQ/NlpA family ABC transporter substrate-binding protein
no
0.40
11
HGI48
_RS20770
DUF1820 family protein
no
0.40
12
HGI48
_RS01175
sigma D regulator
no
0.39
13
HGI48
_RS14510
YfcL family protein
no
0.39
14
HGI48
_RS03185
transcription elongation factor GreA
no
0.38
15
HGI48
_RS12460
transcriptional regulator TyrR
no
0.37
16
HGI48
_RS10590
ribulokinase
no
0.37
17
HGI48
_RS06415
two-component system sensor histidine kinase KdpD
no
0.37
18
HGI48
_RS02505
FAD-dependent urate hydroxylase HpxO
no
0.37
19
HGI48
_RS17635
hypothetical protein
no
0.37
20
HGI48
_RS12445
penicillin acylase family protein
no
0.36
Or look for
negative cofitness