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Cofit
Protein
Homologs
Top cofit genes for HER17_RS20265 from
Pectobacterium carotovorum WPP14
AAA family ATPase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HER17
_RS20895
isoaspartyl peptidase/L-asparaginase
no
0.75
2
HER17
_RS09855
sulfotransferase
no
0.74
3
HER17
_RS15800
SmdA family multidrug ABC transporter permease/ATP-binding protein
no
0.71
4
HER17
_RS18115
ATP-binding cassette domain-containing protein
no
0.70
5
HER17
_RS19575
helix-turn-helix domain-containing protein
no
0.69
6
HER17
_RS13615
KilA-N domain-containing protein
no
0.69
7
HER17
_RS05585
DNA/RNA nuclease SfsA
no
0.68
8
HER17
_RS15905
YajQ family cyclic di-GMP-binding protein
no
0.67
9
HER17
_RS10355
6-phospho-beta-glucosidase
no
0.67
10
HER17
_RS15805
Lrp/AsnC family transcriptional regulator
no
0.66
11
HER17
_RS16135
pectate lyase
no
0.65
12
HER17
_RS06275
lipid kinase YegS
no
0.64
13
HER17
_RS05630
glutathione S-transferase
no
0.63
14
HER17
_RS17590
fructuronate reductase
no
0.62
15
HER17
_RS09755
acyltransferase
no
0.62
16
HER17
_RS13945
CDP-diacylglycerol diphosphatase
no
0.61
17
HER17
_RS16000
ACP phosphodiesterase
no
0.61
18
HER17
_RS16205
Hcp family type VI secretion system effector
no
0.61
19
HER17
_RS04145
TonB-dependent siderophore receptor
no
0.61
20
HER17
_RS13930
AraC family transcriptional regulator
no
0.61
Or look for
negative cofitness